Phenotypic and genotypic insights into a halotolerant bacterium with antimicrobial potential from El Golea Lake
Abstract
Introduction: The antimicrobial potential of a halotolerant bacterial strain, LMB3982, isolated from the
hypersaline Lake El Golea in Algeria at 25% NaCl (w/v), was investigated. The study aimed to evaluate the
antimicrobial activity of this strain and to characterize its phenotypic and genotypic properties, with a focus on
its bioactive compounds and environmental adaptability.
Methods: The strain was subjected to primary and secondary screenings for antimicrobial activity against a
panel of test microorganisms. The influence of growth medium and incubation time on the production of
antimicrobial metabolites was assessed. Various organic solvents were used to extract antimicrobial compounds,
which were then evaluated for their efficacy. Thin-layer chromatography (TLC) was performed on chloroformic
extracts using three solvent systems, and chemical properties were analyzed using infrared (IR) s pectroscopy.
Additionally, a taxonomic study based on phenotypic and genotypic identification, including 16S rRNA gene
sequencing, was conducted.
Results: Strain LMB3982 demonstrated significant antimicrobial activity against most test microorganisms, with
maximum activity observed after 72 hours of culture on nutrient agar. Chloroform was identified as the most
effective solvent for extracting bioactive compounds. TLC analysis revealed the presence of two types of
molecules: amines and phenols. IR spectros copy confirmed these findings, showing characteristic peaks
corresponding to these compounds. Biochemical tests indicated that the strain could produce various enzymes,
utilize multiple sugars, and grow under a wide range of conditions: NaCl concentrations of 0–25%, pH levels of
5–11, and temperatures of 15–37°C. Phylogenetic analysis of the 16S rRNA gene sequence positioned strain
LMB3982 as a novel taxon within the Bacillales order, showing 96% similarity to Bacillus pseudofirmus and
93.3% to Bacillus halodurans
Conclusion:. These findings highlight the potential of strain LMB3982 for biotechnological applications,
particularly in the production of novel antimicrobial compounds and enzymes adapted to extreme conditions.
References
– Balouiri, M., Sadiki, M., & Ibnsouda, S. K. (2016). Methods for in vitro evaluating antimicrobial activity: A
review. Journal of pharmaceutical analysis, 6(2), 71–79. https://doi.org/10.1016/j.jpha.2015.11.005
– Bauer, A. W., Kirby, W. M., Sherris, J. C., & Turck, M. (1966). Antibiotic susceptibility testing by a
standardized single disk method. American journal of clinical pathology, 45(4), 493–496.
– Caulier, S., Nannan, C., Gillis, A., Licciardi, F., Bragard, C., & Mahillon, J. (2019). Overview of the
Antimicrobial Compounds Produced by Members of the Bacillus subtilis Group. Frontiers in
microbiology, 10, 302. https://doi.org/10.3389/fmicb.2019.00302
– Chen, L., Wang, G., Bu, T., Zhang, Y., Wang, Y., Liu, M., & Lin, X. (2010). Phylogenetic analysis and
screening of antimicrobial and cytotoxic activities of moderately halophilic bacteria isolated from the Weihai
Solar Saltern (China). World Journal of Microbiology and Biotechnology, 26, 879-888.
– Corral, P., Amoozegar, M. A., & Ventosa, A. (2019). Halophiles and Their Biomolecules: Recent Advances
and Future Applications in Biomedicine. Marine drugs, 18(1), 33. https://doi.org/10.3390/md18010033
– Giani, M., Garbayo, I., Vílchez, C., & Martínez-Espinosa, R. M. (2019). Haloarchaeal Carotenoids: Healthy
Novel Compounds from Extreme Environments. Marine drugs, 17(9), 524.
https://doi.org/10.3390/md17090524
– Hasan, F., Khan, S., Shah, A. A., & Hameed, A. (2009). Production of antibacterial compounds by free and
immobilized Bacillus pumilus SAF1. Pakistan Journal of Botanic, 41(3), 1499-1510.
– Hellany, H., Assaf, J. C., Barada, S., el-Badan, D., Hajj, R. E., Abou Najem, S., Abou Fayad, A. G., &
Khalil, M. I. (2024). Isolation and Characterization of Bacillus Subtilis BSP1 from Soil: An timicrobial
Activity and Optimization of Fermentation Conditions. Processes, 12(8), 1621.
https://doi.org/10.3390/pr12081621
– Hellany, H., Assaf, J. C., Barada, S., el-Badan, D., Hajj, R. E., Abou Najem, S., Abou Fayad, A. G., &
Khalil, M. I. (2024). Isolation and Characterization of Bacillus Subtilis BSP1 from Soil: Antimicrobial
Activity and Optimization of Fermentation Conditions. Processes, 12(8), 1621.
https://doi.org/10.3390/pr12081621
– Khanna, M., Solanki, R., & Lal, R. (2011). Selective isolation of rare actinomycetes producing novel
antimicrobial compounds . International Journal of Advanced Biotechnology and Research, 2(3), 357-375.
– Kharroub, K., Quesada, T., Ferrer, R., Fuentes, S., Aguilera, M., Boulahrouf, A., Ramos -Cormenzana, A., &
Monteoliva-Sánchez, M. (2006). Halorubrum ezzemoulense sp. nov. a halophilic archaeon isolated from
Ezzemoul sabkha, Algeria. International journal of systematic and evolutionary microbiology, 56(Pt 7),
–1588. https://doi.org/10.1099/ijs.0.64272-0
– Kim, H. Y., Heo, doY., Park, H. M., Singh, D., & Lee, C. H. (2016). Metabolomic and Transcriptomic
Comparison of Solid-State and Submerged Fermentation of Penicillium expansum KACC 40815. PloS
one, 11(2), e0149012. https://doi.org/10.1371/journal.pone.0149012
– Logan, N. A., Berge, O., Bishop, A. H., Busse, H. J., De Vos, P., Fritze, D., Heyndrickx, M., Kämpfer, P.,
Rabinovitch, L., Salkinoja-Salonen, M. S., Seldin, L., & Ventosa, A. (2009). Proposed minimal standards for
describing new taxa of aerobic, endospore-forming bacteria. International journal of systematic and
evolutionary microbiology, 59(Pt 8), 2114–2121. https://doi.org/10.1099/ijs.0.013649-0
– Menasria, T., Monteoliva-Sánchez, M., Benammar, L., Benhadj, M., Ayachi, A., Hacène, H., Gonzalez-
Paredes, A., & Aguilera, M. (2019). Culturable halophilic bacteria inhabiting Algerian saline ecosystems: A
source of promising features and potentialities. World journal of microbiology & biotechnology, 35(9), 132.
https://doi.org/10.1007/s11274-019-2705-y
– Messaoudi, O., Bendahou, M., Benamar, I., & Abdelwouhid, D. E. (2015). Identification and preliminary
characterization of non-polyene antibiotics secreted by new strain of actinomycete isolated from sebkha of
Kenadsa, Algeria. Asian pacific journal of Tropical biomedicine, 5(6), 438-445.https://
doi.org/10.1016/j.apjtb.2015.04.002
– Nas, F., Aissaoui, N., Mahjoubi, M., Mosbah, A., Arab, M., Abdelwahed, S., Khrouf, R., Masmoudi, A. S.,
Cherif, A., & Klouche-Khelil, N. (2021). A comparative GC-MS analysis of bioactive secondary metabolites
produced by halotolerant Bacillus spp. isolated from the Great Sebkha of Oran. International microbiology :
the official journal of the Spanish Society for Microbiology, 24(3), 455–470. https://doi.org/10.1007/s10123-
-00185-x
– Quadri, I., Hassani, I. I., l'Haridon, S., Chalopin, M., Hacène, H., & Jebbar, M. (2016). Characterization and
antimicrobial potential of extremely halophilic archaea isolated from hypersaline environments of the
Algerian Sahara. Microbiological research, 186-187, 119–131. https://doi.org/10.1016/j.micres.2016.04.003
– Seyedsayamdost M. R. (2019). Toward a global picture of bacterial secondary metabolism. Journal of
industrial microbiology & biotechnology, 46(3-4), 301–311. https://doi.org/10.1007/s10295-019-02136-y
– Singh, P., Jain, K., Desai, C., Tiwari, O., &Madamwar, D. (2019). Microbial community dynamics of
extremophiles/extreme environment. In: Microbial Diversity in the Genomic Era, (eds) S Das and HR
Dash (San Dieg, CA: Academic Press),323–332.https://doi:10.1016/b978-0-12-814849-5.00018-6
– Soliman, K. M., & Badeaa, R. I. (2002). Effect of oil extracted from some medicinal plants on different
mycotoxigenic fungi. Food and chemical toxicology : an international journal published for the British
Industrial Biological Research Association, 40(11), 1669–1675. https://doi.org/10.1016/s0278-
(02)00120-5
– Sumi, C. D., Yang, B. W., Yeo, I. C., & Hahm, Y. T. (2015). Antimicrobial peptides of the genus Bacillus: a
new era for antibiotics. Canadian journal of microbiology, 61(2), 93–103. https://doi.org/10.1139/cjm-2014-
– Wu, D., Fu, L., Cao, Y., Dong, N., & Li, D. (2023). Genomic insights into antimicrobial potential and
optimization of fermentation conditions of pig-derived Bacillus subtilis BS21. Frontiers in microbiology, 14,